USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

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Searching in 'USC-OGP 2-DE database' for entry matching: P52597 USC-OGP 2-DE database:  P52597 P52597 General information about the entry View entry in simple text format Entry name HNRPF_HUMAN Primary accession number P52597 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Heterogeneous nuclear ribonucleoprotein F; Short=hnRNP F; AltName: Full=Nucleolin-like protein mcs94-1; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein F, N-terminally processed;. Gene name Name=HNRNPF Synonyms=HNRPF Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_5-6 {PLATELET 5-6} Homo sapiens (Human)   map experimental info   PLATELET_5-6 MAP LOCATIONS: SPOT OGP-0768: pI=5.32; Mw=30902 Cross-references UniProtKB/Swiss-Prot P52597; HNRPF_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name HNRPF_HUMAN Primary accession number P52597 Secondary accession number(s) B3KM84 Q5T0N2 Q96AU2 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 189) Name and origin of the protein Description RecName: Full=Heterogeneous nuclear ribonucleoprotein F; Short=hnRNP F; AltName: Full=Nucleolin-like protein mcs94-1; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein F, N-terminally processed; Gene name Name=HNRNPF Synonyms=HNRPF Encoded on Name=HNRNPF; Synonyms=HNRPF Keywords 3D-structure; Acetylation; Complete proteome; Direct protein sequencing; Isopeptide bond; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding; Spliceosome; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL L28010; AAC37584.1; -; mRNA EMBL AL512654; CAI17066.1; -; Genomic_DNA EMBL AK001364; BAG50896.1; -; mRNA EMBL CH471160; EAW86595.1; -; Genomic_DNA EMBL BC001432; AAH01432.1; -; mRNA EMBL BC004254; AAH04254.1; -; mRNA EMBL BC015580; AAH15580.1; -; mRNA EMBL BC016736; AAH16736.1; -; mRNA EMBL BC106008; AAI06009.1; -; mRNA CCDS CCDS7204.1; -; . PIR S43484; S43484; . RefSeq NP_001091674.1; NM_001098204.1; . RefSeq NP_001091675.1; NM_001098205.1; . RefSeq NP_001091676.1; NM_001098206.1; . RefSeq NP_001091677.1; NM_001098207.1; . RefSeq NP_001091678.1; NM_001098208.1; . RefSeq NP_004957.1; NM_004966.3; . UniGene Hs.712955; -; . UniGene Hs.808; -; . PDB 2HGL; NMR; -; A=1-102 PDB 2HGM; NMR; -; A=103-194 PDB 2HGN; NMR; -; A=277-381 PDB 2KFY; NMR; -; A=1-102 PDB 2KG0; NMR; -; A=103-194 PDB 2KG1; NMR; -; A=277-381 PDB 3TFY; X-ray; 2.75 A; D/E/F=2-10 PDBsum 2HGL; -; . PDBsum 2HGM; -; . PDBsum 2HGN; -; . PDBsum 2KFY; -; . PDBsum 2KG0; -; . PDBsum 2KG1; -; . PDBsum 3TFY; -; . ProteinModelPortal P52597; -; . SMR P52597; -; . BioGrid 109426; 173; . DIP DIP-33145N; -; . IntAct P52597; 118; . MINT MINT-1157890; -; . STRING 9606.ENSP00000338477; -; . iPTMnet P52597; -; . PhosphoSitePlus P52597; -; . SwissPalm P52597; -; . BioMuta HNRNPF; -; . DMDM 1710628; -; . OGP P52597; -; . EPD P52597; -; . MaxQB P52597; -; . PaxDb P52597; -; . PeptideAtlas P52597; -; . PRIDE P52597; -; . DNASU 3185; -; . Ensembl ENST00000337970; ENSP00000338477; ENSG00000169813; . Ensembl ENST00000356053; ENSP00000348345; ENSG00000169813; . Ensembl ENST00000357065; ENSP00000349573; ENSG00000169813; . Ensembl ENST00000443950; ENSP00000400433; ENSG00000169813; . Ensembl ENST00000544000; ENSP00000438061; ENSG00000169813; . GeneID 3185; -; . KEGG hsa:3185; -; . UCSC uc001jar.2; human; . CTD 3185; -; . DisGeNET 3185; -; . GeneCards HNRNPF; -; . HGNC HGNC:5039; HNRNPF; . HPA HPA016884; -; . HPA HPA069667; -; . MIM 601037; gene; . neXtProt NX_P52597; -; . OpenTargets ENSG00000169813; -; . PharmGKB PA162391271; -; . eggNOG KOG4211; Eukaryota; . eggNOG ENOG410Z6M0; LUCA; . GeneTree ENSGT00760000119102; -; . HOGENOM HOG000220896; -; . HOVERGEN HBG055557; -; . InParanoid P52597; -; . KO K12898; -; . OMA FLSECKI; -; . OrthoDB EOG091G0CTJ; -; . PhylomeDB P52597; -; . TreeFam TF316157; -; . Reactome R-HSA-6803529; FGFR2 alternative splicing; . Reactome R-HSA-72163; mRNA Splicing - Major Pathway; . Reactome R-HSA-72203; Processing of Capped Intron-Containing Pre-mRNA; . ChiTaRS HNRNPF; human; . EvolutionaryTrace P52597; -; . GeneWiki HNRPF; -; . GenomeRNAi 3185; -; . PRO PR:P52597; -; . Proteomes UP000005640; Chromosome 10; . Bgee ENSG00000169813; -; . CleanEx HS_HNRNPF; -; . ExpressionAtlas P52597; baseline and differential; . Genevisible P52597; HS; . GO GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0005634; C:nucleus; TAS:ProtInc; . GO GO:0000166; F:nucleotide binding; IEA:InterPro; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB; . GO GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome; . GO GO:0010467; P:gene expression; TAS:Reactome; . GO GO:0000398; P:mRNA splicing; via spliceosome; IC:UniProtKB GO GO:0043484; P:regulation of RNA splicing; IDA:UniProtKB; . GO GO:0006396; P:RNA processing; TAS:ProtInc; . Gene3D 3.30.70.330; -; 3; . InterPro IPR012677; Nucleotide-bd_a/b_plait; . InterPro IPR000504; RRM_dom; . InterPro IPR012996; Znf_CHHC; . Pfam PF00076; RRM_1; 2; . Pfam PF08080; zf-RNPHF; 1; . SMART SM00360; RRM; 3; . SUPFAM SSF54928; SSF54928; 3; . PROSITE PS50102; RRM; 2; .

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